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About This Journal
Applications in Plant Sciences (APPS) is a monthly, peer-reviewed, open access journal promoting the rapid dissemination of newly developed, innovative tools and protocols in all areas of the plant sciences, including genetics, structure, function, development, evolution, systematics, and ecology. Given the rapid progress today in technology and its application in the plant sciences, the goal of APPS is to foster communication within the plant science community to advance scientific research. APPS is a publication of the Botanical Society of America, originating in 2009 as the American Journal of Botany's online-only section, AJB Primer Notes & Protocols in the Plant Sciences.
Featured Articles
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More >Open access
Issue Information
- Applications in Plant Sciences
-  27 February 2021
Open accessHigh‐throughput methods for efficiently building massive phylogenies from natural history collections
- Ryan A. Folk
- Heather R. Kates
- Raphael LaFrance
- Douglas E. Soltis
- Pamela S. Soltis
- Robert P. Guralnick
- Applications in Plant Sciences
-  27 February 2021
Open accessEvaluation of sampling effort required to assess pollen species richness on pollinators using rarefaction
- Applications in Plant Sciences
-  27 February 2021
Open accessPilot RNA‐seq data from 24 species of vascular plants at Harvard Forest
- Applications in Plant Sciences
-  14 February 2021
Open accessIssue Information
- Applications in Plant Sciences
-  29 January 2021
Open accessGenomic and transcriptomic resources for candidate gene discovery in the Ranunculids
- Applications in Plant Sciences
-  29 January 2021
Abstract
This study provides genomic and transcriptomic resources for Thalictrum (Ranunculaceae), a representative of an early‐diverging lineage of eudicots with distinct floral morphologies representing diversity in sexual and pollination systems. A draft genome and floral transcriptome were generated for T. thalictroides, a representative insect‐pollinated, diploid species with hermaphroditic flowers, and transcriptomes were generated for the two flower types of the andromonoecious, wind‐pollinated, and tetraploid species T. hernandezii. Transposable elements, molecular markers, and putative candidate genes are characterized as resources for future follow‐up studies.
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The following is a list of the most cited articles based on citations published in the last three years, according to CrossRef.
Open accessPlann: A command‐line application for annotating plastome sequences
- Applications in Plant Sciences
-  10 August 2015
Open accessEasy Leaf Area: Automated digital image analysis for rapid and accurate measurement of leaf area
- Applications in Plant Sciences
-  9 July 2014
Open accessHyb‐Seq: Combining target enrichment and genome skimming for plant phylogenomics
- Kevin Weitemier
- Shannon C. K. Straub
- Richard C. Cronn
- Mark Fishbein
- Roswitha Schmickl
- Angela McDonnell
- Aaron Liston
- Applications in Plant Sciences
-  29 August 2014
Open accessHybPiper: Extracting coding sequence and introns for phylogenetics from high‐throughput sequencing reads using target enrichment
- Matthew G. Johnson
- Elliot M. Gardner
- Yang Liu
- Rafael Medina
- Bernard Goffinet
- A. Jonathan Shaw
- Nyree J. C. Zerega
- Norman J. Wickett
- Applications in Plant Sciences
-  12 July 2016
Open accessIs biomass a reliable estimate of plant fitness?
- Applications in Plant Sciences
-  14 February 2017
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more >Open access
Using clear plastic CD cases as low‐cost mini‐rhizotrons to phenotype root traits
-  19 April 2020
Open accessStrategies for reducing per‐sample costs in target capture sequencing for phylogenomics and population genomics in plants
-  14 April 2020
Open accessEasy Leaf Area: Automated digital image analysis for rapid and accurate measurement of leaf area
-  9 July 2014
Open accessConducting botanical research with limited resources: Low‐cost methods in the plant sciences
-  20 April 2020




